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Compounds

COMPOUND NPA001250

STRUCTURE
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PROPERTIES
NPAID NPA001250
CLUSTER ID 834
NODE ID 723
NAME Yatakemycin
FORMULA C35H29N5O8S
MOLECULAR WEIGHT (Da) 679.7110
ACCURATE MASS (Da) 679.1737
ORIGIN ORGANISM TYPE Bacterium
ORIGIN GENUS Streptomyces
ORIGIN SPECIES sp. TP-A0356
InChIKey CMFSXTISUXTEGX-QXPWRNTLSA-N
InChI InChI=1S/C35H29N5O8S/c1-47-25-10-19-14(7-23(25)41)6-20(36-19)33(45)40-13-15-12-35(15)18-9-21(37-28(18)24(42)11-26(35)40)32(44)39-5-4-16-17-8-22(34(46)49-3)38-27(17)31(48-2)30(43)29(16)39/h6-11,15,36-38,41,43H,4-5,12-13H2,1-3H3/t15-,35-/m1/s1
SMILES COC1=C(O)C=C2C=C(C(=O)N3C[C@H]4C[C@@]45C3=CC(=O)C3=C5C=C(C(=O)N4CCC5=C6C=C(C(=O)SC)NC6=C(OC)C(O)=C54)N3)NC2=C1
ORIGINAL ISOLATION REFERENCE
CITATION Igarashi, Yasuhiro; Futamata, Katsuyuki; Fujita, Tsuyoshi; Sekine, Akira; Senda, Hisato; Naoki, Hideo; Furumai, Tamotsu Yatakemycin, a novel antifungal antibiotic produced by Streptomyces sp. TP-A0356 Journal of Antibiotics 2003 56 (2) 107-113.
DOI 10.7164/antibiotics.56.107 PMID 12715869
ORIGINAL ISOLATION TAXONOMY
RANK NAME DB LINK NCBI
Domain Bacteria LPSN 2
Phylum Actinobacteria LPSN 201174
Class Actinobacteria LPSN -
Order Streptomycetales LPSN 85011
Family Streptomycetaceae LPSN 2062
Genus Streptomyces LPSN 1883
SYNTHESES
CITATION 1 Tichenor MS; Kastrinsky DB; Boger DL Total synthesis, structure revision, and absolute configuration of (+)-yatakemycin. Journal of the American Chemical Society 2004 126 (27) 8396-8398. DOI: 10.1021/ja0472735 PMID: 15237994
CITATION 2 Okano K; Tokuyama H; Fukuyama T Total synthesis of (+)-yatakemycin. Journal of the American Chemical Society 2006 128 (22) 7136-7137. DOI: 10.1021/ja0619455 PMID: 16734447
CITATION 3 Tichenor MS; Trzupek JD; Kastrinsky DB; Shiga F; Hwang I; Boger DL Asymmetric total synthesis of (+)- and ent-(-)-yatakemycin and duocarmycin SA: evaluation of yatakemycin key partial structures and its unnatural enantiomer. Journal of the American Chemical Society 2006 128 (49) 15683-15696. DOI: 10.1021/ja064228j PMID: 17147378
CITATION 4 Tichenor MS; Boger DL Yatakemycin: total synthesis, DNA alkylation, and biological properties. Natural Product Reports 2008 25 (2) 220-226. DOI: 10.1039/b705665f PMID: 18389136
CITATION 5 Okano K; Tokuyama H; Fukuyama T Total synthesis of (+)-yatakemycin. Chemistry – An Asian Journal 2008 3 (2) 296-309. DOI: 10.1002/asia.200700282 PMID: 18000998
REVISIONS
VERSION SMILES CITATION
Original Isolation CC(=O)SC1=CC2=C3CCN(C3=C(C(=C2N1)OC)O)C(=O)C4=CC5=C(N4)C(=O)C=C6C57CC7CN6C(=O)C8=CC9=CC(=C(C=C9N8)O)OC Igarashi, Yasuhiro; Futamata, Katsuyuki; Fujita, Tsuyoshi; Sekine, Akira; Senda, Hisato; Naoki, Hideo; Furumai, Tamotsu Yatakemycin, a novel antifungal antibiotic produced by Streptomyces sp. TP-A0356 Journal of Antibiotics 2003 56 (2) 107-113. DOI: 10.7164/antibiotics.56.107 PMID: 12715869
2 COC1=C(O)C=C2C=C(C(=O)N3C[C@H]4C[C@@]45C3=CC(=O)C3=C5C=C(C(=O)N4CCC5=C6C=C(C(=O)SC)NC6=C(OC)C(O)=C54)N3)NC2=C1 Tichenor MS; Kastrinsky DB; Boger DL Total synthesis, structure revision, and absolute configuration of (+)-yatakemycin. Journal of the American Chemical Society 2004 126 (27) 8396-8398. DOI: 10.1021/ja0472735 PMID: 15237994
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